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Junior Data Scientist – Transcriptomics & Omics Data Analysis | Single Cell Discoveries

TATAA Biocenter

Utrecht
Full-time
2-5 years experience
On-site

Key Skills

Single-Cell Data Analysis
Transcriptomics
Bulk RNA Sequencing
Spatial Transcriptomics
R
Python
Linux
Seurat
Bioconductor
Scanpy
Nextflow
Docker
Client Communication
Project Management
Experimental Design

Job Description

This position is based at Single Cell Discoveries (SCD) in the Netherlands. Following the acquisition of TATAA Biocenter by Single Cell Discoveries, TATAA and SCD are now part of the same group. We're looking for a motivated Junior Data Scientist to join the Data Science team at Single Cell Discoveries. In this role, you’ll work with cutting-edge transcriptomics and other omics datasets, helping researchers and industry partners turn complex biological data into meaningful insights. Our team supports clients through tailor-made data analysis projects, from discussing project goals and interpreting results to delivering actionable biological insights. You'll gain hands-on experience analyzing single-cell and bulk RNA-seq data, interacting with clients, and contributing to the development of our analysis workflows and tools. Working closely with experienced scientists and data scientists across the organization, you'll have the opportunity to grow your technical, consulting, and communication skills while helping advance exciting research projects. You will report directly to the Head of Data Science. Who are we? Single Cell Discoveries is a fast-growing biotech start-up providing single-cell sequencing services to academic and industrial clients worldwide. With a team of around 50 colleagues, we offer cutting-edge single-cell, bulk, and spatial transcriptomics sequencing. In parallel, our R&D department develops new sequencing technologies and works on translating single-cell approaches toward clinical applications. What will you do? Analyze data from single-cell, spatial and bulk transcriptomics experiments. Occasionally also other omics datasets, such as proteomics. Work closely with our clients to understand their biological question and help them interpret the data we generate for them. Keep track of and manage your projects. Work with our sales team to scope out projects and advise clients on next steps. Build products & workflows: You will help in building new workflows, tools, and pipelines for the development of new data analysis services. Research: You will (occasionally) work on internal R&D projects by supporting the data interpretation of new technologies and services our company develops. Your skills & background A MSc degree (or equivalent) in Bioinformatics, Computational Biology, Data Science, Statistics, Computer Science, Biotechnology, or a related field. 1-3 years of experience with single-cell sequencing data science. Fluent in R or Python. Comfortable in a Linux environment. Experience with Nextflow is a plus. You are very familiar with Seurat, Bioconductor ScanPy or other single-cell analysis methods. Familiarity with containerization tools such as Docker is a plus. Experience with wet-lab experiments or experimental design is a plus. You have a flexible mindset and adapt quickly to changing environments. You perform well while managing different projects and tight deadlines. You master the English language (both orally and in writing) and can explain and communicate results efficiently. You are a team player and enjoy working with other scientists, both wet and dry lab. We recognize that great candidates don't always tick every box. If you're enthusiastic about this role and have a strong foundation in data science, bioinformatics, or computational biology, we encourage you to apply even if your experience doesn't align perfectly with every qualification listed. Why take this job? You will be part of a collaborative and highly skilled team in an international biotech company. You will interact with an international client base. Generous benefits like ample annual leave of 30 days plus national holidays and an excellent pension plan. Need more info? You are free to contact our HR department if you have any questions about the job opening ([email protected]). Single Cell Discoveries B.V. Varrolaan 100 3584 BW Utrecht The Netherlands www.scdiscoveries.com

Core Responsibilities

Analyze single-cell, spatial, and bulk transcriptomics data, and occasionally other omics datasets, to help clients interpret results and derive biological insights. Manage client projects, support project scoping with the sales team, develop analysis workflows and tools, and occasionally contribute to internal R&D projects.

Requirements

Requires a master's degree or equivalent in bioinformatics, computational biology, data science, statistics, computer science, biotechnology, or a related field, plus 1–3 years of experience with single-cell sequencing data science. Candidates should be fluent in R or Python, comfortable with Linux, familiar with single-cell analysis methods, and able to communicate effectively in English; Nextflow, Docker, and wet-lab or experimental-design experience are advantages.

Benefits

  • 30 Days Of Annual Leave Plus National Holidays
  • Excellent Pension Plan

About TATAA Biocenter

Industry: Biotechnology

Company size: 51-200 employees

At TATAA Biocenter, we offer PCR bioanalytical services to address the challenges in nucleic acid therapy drug development. Our mission as a CRO is to provide assay development, validation, and high-throughput analyses with high sensitivity for regulated and non-regulated bioanalysis, clinical biomarkers, and manufacturing quality assessments to accelerate your time-to-market. As your extended workbench of specialists and dedicated partner, we prioritize quality, innovation, and building strong client relationships. We are a GLP-accredited, GCLP-compliant, and ISO/IEC 17025-certified laboratory. Our purpose-built facility for nucleic acid analyses enhances sensitivity and minimizes contamination risks. With state-of-the-art instrumentation and an IT structure ensuring the highest data integrity and sample management, our collaborative and highly skilled scientists deliver advanced competence and precise execution.

Added 2 days ago